Liste des articles pour l'épreuve orale de DEA option interface physique biologie

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1 The bacteriophage phi 29 portal motor can package DNA against a large internal force
DE. Smith, SJ. Tans, SB. Smith, S. Grimes, DL. Anderson, C. Bustamante,
Nature (2001) 413-6857 p.748 PDF
2 Processive translocation and DNA unwinding by individual RecBCD enzyme molecules
PR. Bianco, LR. Brewer, M. Corzett, RL. Balhorn, Y. Yeh, SC. Kowalczykowski, RJ. Baskin,
Nature (2001) 409-6818 p.374 PDF
3 Wrapping of DNA around the E.coli RNA polymerase open promoter complex
C. Rivetti, M. Guthold, C. Bustamante,
Embo J. (1999) 18-16 p.4464 PDF
4 Single-pair fluorescence resonance energy transfer on freely diffusing molecules: Observation of Forster distance dependence and subpopulations
AA. Deniz, M. Dahan, JR. Grunwell, TJ. Ha, AE. Faulhaber, DS. Chemla, S. Weiss, PG. Schultz,
Proc. Natl. Acad. Sci. U. S. A. (1999) 96-7 p.3670 PDF
5 Single-molecule protein folding: Diffusion fluorescence resonance energy transfer studies of the denaturation of chymotrypsin inhibitor 2
AA. Deniz, TA. Laurence, GS. Beligere, M. Dahan, AB. Martin, DS. Chemla, PE. Dawson, PG. Schultz, S. Weiss,
Proc. Natl. Acad. Sci. U. S. A. (2000) 97-10 p.5179 PDF
6 Single kinesin molecules studied with a molecular force clamp
K. Visscher, MJ. Schnitzer, SM. Block,
Nature (1999) 400-6740 p.184 PDF
7 Forward and reverse motion of single RecBCD molecules on DNA
TT. Perkins, HW. Li, RV. Dalal, J. Gelles, SM. Block,
Biophys. J. (2004) 86-3 p.1640 PDF
8 Sequence-dependent pausing of single lambda exonuclease molecules
TT. Perkins, RV. Dalal, PG. Mitsis, SM. Block,
Science (2003) 301-5641 p.1914 PDF
9 The motor domain determines the large step of myosin-V
H. Tanaka, K. Homma, AH. Iwane, E. Katayama, R. Ikebe, J. Saito, T. Yanagida, M. Ikebe,
Nature (2002) 415-6868 p.192 PDF
10 F-1-ATPase is a highly efficient molecular motor that rotates with discrete 120 degrees steps
R. Yasuda, H. Noji, K. Kinosita, M. Yoshida,
Cell (1998) 93-7 p.1117 PDF
11 FLUCTUATION ANALYSIS OF MOTOR PROTEIN MOVEMENT AND SINGLE ENZYME-KINETICS
K. Svoboda, PP. Mitra, SM. Block,
Proc. Natl. Acad. Sci. U. S. A. (1994) 91-25 p.11782 PDF
12 Observing spontaneous branch migration of Holliday junctions one step at a time
SA. Mckinney, ADJ. Freeman, DMJ. Lilley, TJ. Ha,
Proc. Natl. Acad. Sci. U. S. A. (2005) 102-16 p.5715 PDF
13 Initiation and re-initiation of DNA unwinding by the E. coli Rep helicase
T. Ha, I. Rasnik, W. Cheng, HP. Babcock, GH. Gauss, TM. Lohman, S. Chu,
Biophys. J. (2003) 84-2 p.301A PDF
14 Kinesin walks hand-over-hand
A. Yildiz, M. Tomishige, RD. Vale, PR. Selvin,
Science (2004) 303-5658 p.676 PDF
15 DNA transport into Bacillus subtilis requires proton motive force to generate large molecular forces
B. Maier, I. Chen, D. Dubnau, MP. Sheetz,
Nat. Struct. Mol. Biol. (2004) 11-7 p.643 PDF
16 Rotational drag on DNA: A single molecule experiment
P. Thomen, U. Bockelmann, F. Heslot,
Phys. Rev. Lett. (2002) 88-24 p. PDF
17 Unzipping DNA with optical tweezers: high sequence sensitivity and force flips
U. Bockelmann, P. Thomen, B. Essevaz-roulet, V. Viasnoff, F. Heslot,
Biophys. J. (2002) 82-3 p.1537 PDF
18 An automated two-dimensional optical force clamp for single molecule studies
MJ. Lang, CL. Asbury, JW. Shaevitz, SM. Block,
Biophys. J. (2002) 83-1 p.491 PDF
19 An ultrasensitive bacterial motor revealed by monitoring signaling proteins in single cells
P. Cluzel, M. Surette, S. Leibler,
Science (2000) 287-5458 p.1652 PDF
20 Single-molecule optomechanical cycle
T. Hugel, NB. Holland, A. Cattani, L. Moroder, M. Seitz, HE. Gaub,
Science (2002) 296-5570 p.1103 PDF
21 Correlating structural dynamics and function in single ribozyme molecules
XW. Zhuang, HD. Kim, MJB. Pereira, HP. Babcock, NG. Walter, S. Chu,
Science (2002) 296-5572 p.1473 PDF
22 Exploring the energy landscape of GFP by single-molecule mechanical experiments
H. Dietz, M. Rief,
Proc. Natl. Acad. Sci. U. S. A. (2004) 101-46 p.16192 PDF
23 Forces generated during actin-based propulsion: A direct measurement by micromanipulation
Y. Marcy, J. Prost, MF. Carlier, C. Sykes,
Proc. Natl. Acad. Sci. U. S. A. (2004) 101-16 p.5992 PDF
24 Protein conformational dynamics probed by single-molecule electron transfer
H. Yang, GB. Luo, P. Karnchanaphanurach, TM. Louie, I. Rech, S. Cova, LY. Xun, XS. Xie,
Science (2003) 302-5643 p.262 PDF
25 Ubiquitous transcriptional pausing is independent of RNA polymerase backtracking.
Neuman KC, Abbondanzieri EA, Landick R, Gelles J, Block SM.
Cell (2003) 115(4) 437-47 PDF
26 Near-field-magnetic-tweezer manipulation of single DNA molecules
J. Yan, D. Skoko, JF. Marko,
Phys. Rev. E (2004) 70-1 p. PDF
27 Single chromatin fiber stretching reveals physically distinct populations of disassembly events
LH. Pope, ML. Bennink, KA. Van Leijenhorst-groener, D. Nikova, J. Greve, JF. Marko,
Biophys. J. (2005) 88-5 p.3572 PDF
28 ADP-induced rocking of the kinesin motor domain revealed by single-molecule fluorescence polarization microscopy
H. Sosa, EJG. Peterman, WE. Moerner, LSB. Goldstein,
Nat. Struct. Biol. (2001) 8-6 p.540 PDF
29 Real-time observation of DNA translocation by the type I restriction modification enzyme EcoR124I
R. Seidel, J. Van Noort, C. Van Der Scheer, JGP. Bloom, NH. Dekker, CF. Dutta, A. Blundell, T. Robinson, K. Firman, C. Dekker,
Nat. Struct. Mol. Biol. (2004) 11-9 p.838 PDF
30 Sizing DNA using a nanometer-diameter pore
JB. Heng, C. Ho, T. Kim, R. Timp, A. Aksimentiev, YV. Grinkova, S. Sligar, K. Schulten, G. Timp,
Biophys. J. (2004) 87-4 p.2905 PDF